4.4. jsa.seq.split: Split multiple sequence file

jsa.seq.split splits a file containing multiple sequences to each file containing a sequence. It is included in the Japsa package. Please see check the installation page for instructions.

4.4.1. Synopsis

jsa.seq.split: Break a multiple sequence files to each sequence per file

4.4.2. Usage

jsa.seq.split [options]

4.4.3. Options

--input=s	Name of the input file, - for standard input (REQUIRED)
--alphabet=s	Alphabet of the input file. Options: DNA (DNA=DNA16), DNA4 (ACGT), DNA5(ACGTN), DNA16 and Protein (default=’DNA’)
--output=s	Prefix of the output files (default=’out_’)
--format=s	Format of output files. Options : japsa or fasta (default=’fasta’)
--help	Display this usage and exit (default=’false’)